IL_8RCM_011

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

GAAC*GAGUGAAAAAGAAC

Length

18 nucleotides

Bulged bases

8RCM|1|72|A|504, 8RCM|1|72|A|508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCM_011 not in the Motif Atlas

Homologous match to IL_5J7L_255

Geometric discrepancy: 0.0661

The information below is about IL_5J7L_255

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_81516.2

Basepair signature

cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L

Number of instances in this motif group

6

Unit IDs

8RCM|1|72|G|481
8RCM|1|72|A|482
8RCM|1|72|A|483
8RCM|1|72|C|484
*
8RCM|1|72|G|496
8RCM|1|72|A|497
8RCM|1|72|G|498
8RCM|1|72|U|499
8RCM|1|72|G|500
8RCM|1|72|A|501
8RCM|1|72|A|502
8RCM|1|72|A|503
8RCM|1|72|A|504
8RCM|1|72|A|505
8RCM|1|72|G|506
8RCM|1|72|A|507
8RCM|1|72|A|508
8RCM|1|72|C|509

Current chains

Chain 72

23S ribosomal RNA

Nearby chains