IL_8RCM_054

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

8RCM|1|72|A|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCM_054 not in the Motif Atlas

Homologous match to IL_5J7L_295

Geometric discrepancy: 0.18

The information below is about IL_5J7L_295

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

8RCM|1|72|C|1417
8RCM|1|72|G|1418
8RCM|1|72|A|1419
8RCM|1|72|A|1420
8RCM|1|72|G|1421
*
8RCM|1|72|C|1577
8RCM|1|72|U|1578
8RCM|1|72|A|1579
8RCM|1|72|A|1580
8RCM|1|72|G|1581

Current chains

Chain 72

23S ribosomal RNA

Nearby chains