IL_8RCM_067

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

8RCM|1|72|G|1699

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCM_067 not in the Motif Atlas

Geometric match to IL_7RQB_068

Geometric discrepancy: 0.0662

The information below is about IL_7RQB_068

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_65969.2

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

8RCM|1|72|C|1686
8RCM|1|72|G|1687
8RCM|1|72|U|1688
8RCM|1|72|A|1689
8RCM|1|72|A|1690
8RCM|1|72|C|1691
*
8RCM|1|72|G|1696
8RCM|1|72|G|1697
8RCM|1|72|A|1698
8RCM|1|72|G|1699
8RCM|1|72|A|1700
8RCM|1|72|A|1701
8RCM|1|72|G|1702

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain A2

Small subunit ribosomal RNA; SSU rRNA

Chain b2

50S ribosomal protein L2