IL_8RCM_099

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

CUC*GCGAG

Length

8 nucleotides

Bulged bases

8RCM|1|72|G|2576, 8RCM|1|72|A|2577

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCM_099 not in the Motif Atlas

Homologous match to IL_4WF9_095

Geometric discrepancy: 0.0808

The information below is about IL_4WF9_095

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_68118.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

27

Unit IDs

8RCM|1|72|C|2510
8RCM|1|72|U|2511
8RCM|1|72|C|2512
*
8RCM|1|72|G|2574
8RCM|1|72|C|2575
8RCM|1|72|G|2576
8RCM|1|72|A|2577
8RCM|1|72|G|2578

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain p

Nascent chain