IL_8RCM_136

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

UGG*CUGA

Length

7 nucleotides

Bulged bases

8RCM|1|A1|G|388

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCM_136 not in the Motif Atlas

Geometric match to IL_3RG5_002

Geometric discrepancy: 0.3499

The information below is about IL_3RG5_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_68118.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

27

Unit IDs

8RCM|1|A1|U|375
8RCM|1|A1|G|376
8RCM|1|A1|G|377
*
8RCM|1|A1|C|386
8RCM|1|A1|U|387
8RCM|1|A1|G|388
8RCM|1|A1|A|389

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain P1

30S ribosomal protein S16

Chain i2

50S ribosomal protein L9