IL_8RCM_296

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

GGAGGCUUUGAAGU*AUGGAGCCGACCUUGAAAUAC

Length

35 nucleotides

Bulged bases

8RCM|1|72|G|2133, 8RCM|1|72|C|2164, 8RCM|1|72|A|2171, 8RCM|1|72|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RCM|1|72|G|2124
8RCM|1|72|G|2125
8RCM|1|72|A|2126
8RCM|1|72|G|2127
8RCM|1|72|G|2128
8RCM|1|72|C|2129
8RCM|1|72|U|2130
8RCM|1|72|U|2131
8RCM|1|72|U|2132
8RCM|1|72|G|2133
8RCM|1|72|A|2134
8RCM|1|72|A|2135
8RCM|1|72|G|2136
8RCM|1|72|U|2137
*
8RCM|1|72|A|2154
8RCM|1|72|U|2155
8RCM|1|72|G|2156
8RCM|1|72|G|2157
8RCM|1|72|A|2158
8RCM|1|72|G|2159
8RCM|1|72|C|2160
8RCM|1|72|C|2161
8RCM|1|72|G|2162
8RCM|1|72|A|2163
8RCM|1|72|C|2164
8RCM|1|72|C|2165
8RCM|1|72|U|2166
8RCM|1|72|U|2167
8RCM|1|72|G|2168
8RCM|1|72|A|2169
8RCM|1|72|A|2170
8RCM|1|72|A|2171
8RCM|1|72|U|2172
8RCM|1|72|A|2173
8RCM|1|72|C|2174

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain X2

Transfer RNA; tRNA

Chain a2

Large ribosomal subunit protein uL1