IL_8RCS_001

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

GUGGAUG*CUGAAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCS_001 not in the Motif Atlas

Homologous match to IL_5J7L_245

Geometric discrepancy: 0.0895

The information below is about IL_5J7L_245

Detailed Annotation

Triple sheared with non-canonical cWW

Broad Annotation

Triple sheared

Motif group

IL_04021.2

Basepair signature

cWW-L-R-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

8RCS|1|72|G|24
8RCS|1|72|U|25
8RCS|1|72|G|26
8RCS|1|72|G|27
8RCS|1|72|A|28
8RCS|1|72|U|29
8RCS|1|72|G|30
*
8RCS|1|72|C|510
8RCS|1|72|U|511
8RCS|1|72|G|512
8RCS|1|72|A|513
8RCS|1|72|A|514
8RCS|1|72|A|515
8RCS|1|72|C|516

Current chains

Chain 72

23S ribosomal RNA

Nearby chains