IL_8RCS_011

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

GAAC*GAGUGAAAAAGAAC

Length

18 nucleotides

Bulged bases

8RCS|1|72|A|504, 8RCS|1|72|A|508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCS_011 not in the Motif Atlas

Homologous match to IL_5J7L_255

Geometric discrepancy: 0.0683

The information below is about IL_5J7L_255

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_81516.2

Basepair signature

cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L

Number of instances in this motif group

6

Unit IDs

8RCS|1|72|G|481
8RCS|1|72|A|482
8RCS|1|72|A|483
8RCS|1|72|C|484
*
8RCS|1|72|G|496
8RCS|1|72|A|497
8RCS|1|72|G|498
8RCS|1|72|U|499
8RCS|1|72|G|500
8RCS|1|72|A|501
8RCS|1|72|A|502
8RCS|1|72|A|503
8RCS|1|72|A|504
8RCS|1|72|A|505
8RCS|1|72|G|506
8RCS|1|72|A|507
8RCS|1|72|A|508
8RCS|1|72|C|509

Current chains

Chain 72

23S ribosomal RNA

Nearby chains