IL_8RCS_065

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

8RCS|1|72|G|1699

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCS_065 not in the Motif Atlas

Homologous match to IL_5J7L_308

Geometric discrepancy: 0.0813

The information below is about IL_5J7L_308

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_47346.2

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

8RCS|1|72|C|1686
8RCS|1|72|G|1687
8RCS|1|72|U|1688
8RCS|1|72|A|1689
8RCS|1|72|A|1690
8RCS|1|72|C|1691
*
8RCS|1|72|G|1696
8RCS|1|72|G|1697
8RCS|1|72|A|1698
8RCS|1|72|G|1699
8RCS|1|72|A|1700
8RCS|1|72|A|1701
8RCS|1|72|G|1702

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain A2

Small subunit ribosomal RNA; SSU rRNA

Chain b2

50S ribosomal protein L2