IL_8RCS_138
3D structure
- PDB id
- 8RCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (Rotated disome interface class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.46 Å
Loop
- Sequence
- UGAAGAAG*UGUAAAG
- Length
- 15 nucleotides
- Bulged bases
- 8RCS|1|A1|A|412
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RCS_138 not in the Motif Atlas
- Geometric match to IL_4LFB_017
- Geometric discrepancy: 0.1973
- The information below is about IL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28026.3
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
8RCS|1|A1|U|409
8RCS|1|A1|G|410
8RCS|1|A1|A|411
8RCS|1|A1|A|412
8RCS|1|A1|G|413
8RCS|1|A1|A|414
8RCS|1|A1|A|415
8RCS|1|A1|G|416
*
8RCS|1|A1|U|427
8RCS|1|A1|G|428
8RCS|1|A1|U|429
8RCS|1|A1|A|430
8RCS|1|A1|A|431
8RCS|1|A1|A|432
8RCS|1|A1|G|433
Current chains
- Chain A1
- 16S ribosomal RNA
Nearby chains
- Chain 72
- Large subunit ribosomal RNA; LSU rRNA
- Chain D1
- Small ribosomal subunit protein uS4
- Chain K2
- Small ribosomal subunit protein uS11
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