IL_8RCS_155

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

GGU*AUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCS_155 not in the Motif Atlas

Geometric match to IL_4JGN_002

Geometric discrepancy: 0.1423

The information below is about IL_4JGN_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

213

Unit IDs

8RCS|1|A1|G|682
8RCS|1|A1|G|683
8RCS|1|A1|U|684
*
8RCS|1|A1|A|706
8RCS|1|A1|U|707
8RCS|1|A1|C|708

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain K1

Small ribosomal subunit protein uS11