IL_8RCS_268

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

GGGAGGCUUUGAAG*UGGAGCCGACCUUGAAAUACC

Length

35 nucleotides

Bulged bases

8RCS|1|72|U|2131, 8RCS|1|72|U|2132, 8RCS|1|72|A|2170, 8RCS|1|72|A|2171, 8RCS|1|72|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RCS|1|72|G|2123
8RCS|1|72|G|2124
8RCS|1|72|G|2125
8RCS|1|72|A|2126
8RCS|1|72|G|2127
8RCS|1|72|G|2128
8RCS|1|72|C|2129
8RCS|1|72|U|2130
8RCS|1|72|U|2131
8RCS|1|72|U|2132
8RCS|1|72|G|2133
8RCS|1|72|A|2134
8RCS|1|72|A|2135
8RCS|1|72|G|2136
*
8RCS|1|72|U|2155
8RCS|1|72|G|2156
8RCS|1|72|G|2157
8RCS|1|72|A|2158
8RCS|1|72|G|2159
8RCS|1|72|C|2160
8RCS|1|72|C|2161
8RCS|1|72|G|2162
8RCS|1|72|A|2163
8RCS|1|72|C|2164
8RCS|1|72|C|2165
8RCS|1|72|U|2166
8RCS|1|72|U|2167
8RCS|1|72|G|2168
8RCS|1|72|A|2169
8RCS|1|72|A|2170
8RCS|1|72|A|2171
8RCS|1|72|U|2172
8RCS|1|72|A|2173
8RCS|1|72|C|2174
8RCS|1|72|C|2175

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain A1

Small subunit ribosomal RNA; SSU rRNA

Chain W

Transfer RNA; tRNA

Chain a2

Large ribosomal subunit protein uL1