IL_8RCT_011

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

GAAC*GAGUGAAAAAGAAC

Length

18 nucleotides

Bulged bases

8RCT|1|72|A|504, 8RCT|1|72|A|508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_011 not in the Motif Atlas

Homologous match to IL_5J7L_255

Geometric discrepancy: 0.0705

The information below is about IL_5J7L_255

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_81516.2

Basepair signature

cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L

Number of instances in this motif group

6

Unit IDs

8RCT|1|72|G|481
8RCT|1|72|A|482
8RCT|1|72|A|483
8RCT|1|72|C|484
*
8RCT|1|72|G|496
8RCT|1|72|A|497
8RCT|1|72|G|498
8RCT|1|72|U|499
8RCT|1|72|G|500
8RCT|1|72|A|501
8RCT|1|72|A|502
8RCT|1|72|A|503
8RCT|1|72|A|504
8RCT|1|72|A|505
8RCT|1|72|G|506
8RCT|1|72|A|507
8RCT|1|72|A|508
8RCT|1|72|C|509

Current chains

Chain 72

23S ribosomal RNA

Nearby chains