IL_8RCT_034

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

UUAAGUG*CUAAA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_034 not in the Motif Atlas

Geometric match to IL_4WF9_039

Geometric discrepancy: 0.1543

The information below is about IL_4WF9_039

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_57188.5

Basepair signature

cWW-tWW-L-tWW-cWW-cSH

Number of instances in this motif group

5

Unit IDs

8RCT|1|72|U|1018
8RCT|1|72|U|1019
8RCT|1|72|A|1020
8RCT|1|72|A|1021
8RCT|1|72|G|1022
8RCT|1|72|U|1023
8RCT|1|72|G|1024
*
8RCT|1|72|C|1140
8RCT|1|72|U|1141
8RCT|1|72|A|1142
8RCT|1|72|A|1143
8RCT|1|72|A|1144

Current chains

Chain 72

23S ribosomal RNA

Nearby chains