IL_8RCT_097

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

CCAAG*CGACG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_097 not in the Motif Atlas

Homologous match to IL_5J7L_338

Geometric discrepancy: 0.1451

The information below is about IL_5J7L_338

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_17948.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

8RCT|1|72|C|2466
8RCT|1|72|C|2467
8RCT|1|72|A|2468
8RCT|1|72|A|2469
8RCT|1|72|G|2470
*
8RCT|1|72|C|2480
8RCT|1|72|G|2481
8RCT|1|72|A|2482
8RCT|1|72|C|2483
8RCT|1|72|G|2484

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain h2

50S ribosomal protein L16