IL_8RCT_138

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

GGC*GUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_138 not in the Motif Atlas

Geometric match to IL_1ZX7_004

Geometric discrepancy: 0.1612

The information below is about IL_1ZX7_004

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

8RCT|1|A1|G|416
8RCT|1|A1|G|417
8RCT|1|A1|C|418
*
8RCT|1|A1|G|425
8RCT|1|A1|U|426
8RCT|1|A1|U|427

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain D1

Small ribosomal subunit protein uS4