IL_8RCT_156

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

GGGAGC*GUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_156 not in the Motif Atlas

Geometric match to IL_4V88_435

Geometric discrepancy: 0.2224

The information below is about IL_4V88_435

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_22046.1

Basepair signature

cWW-L-cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

8RCT|1|A1|G|774
8RCT|1|A1|G|775
8RCT|1|A1|G|776
8RCT|1|A1|A|777
8RCT|1|A1|G|778
8RCT|1|A1|C|779
*
8RCT|1|A1|G|803
8RCT|1|A1|U|804
8RCT|1|A1|C|805

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain K1

Small ribosomal subunit protein uS11

Chain U1

30S ribosomal protein S21