IL_8RCT_157

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

CAAAC*GGUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_157 not in the Motif Atlas

Geometric match to IL_4LFB_033

Geometric discrepancy: 0.1436

The information below is about IL_4LFB_033

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.7

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

14

Unit IDs

8RCT|1|A1|C|779
8RCT|1|A1|A|780
8RCT|1|A1|A|781
8RCT|1|A1|A|782
8RCT|1|A1|C|783
*
8RCT|1|A1|G|799
8RCT|1|A1|G|800
8RCT|1|A1|U|801
8RCT|1|A1|A|802
8RCT|1|A1|G|803

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain K1

Small ribosomal subunit protein uS11

Chain U1

30S ribosomal protein S21