IL_8RCT_158

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

AGG*CUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_158 not in the Motif Atlas

Geometric match to IL_5C5W_002

Geometric discrepancy: 0.124

The information below is about IL_5C5W_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

8RCT|1|A1|A|831
8RCT|1|A1|G|832
8RCT|1|A1|G|833
*
8RCT|1|A1|C|853
8RCT|1|A1|U|854
8RCT|1|A1|U|855

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain B

Small ribosomal subunit protein uS2

Chain R1

Small ribosomal subunit protein bS18

Chain U1

30S ribosomal protein S21