IL_8RCT_164

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

GG*CAC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_164 not in the Motif Atlas

Homologous match to IL_5J7L_042

Geometric discrepancy: 0.3163

The information below is about IL_5J7L_042

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_51454.3

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

45

Unit IDs

8RCT|1|A1|G|953
8RCT|1|A1|G|954
*
8RCT|1|A1|C|1226
8RCT|1|A1|A|1227
8RCT|1|A1|C|1228

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain M1

Small ribosomal subunit protein uS13

Chain S1

Small ribosomal subunit protein uS19

Chain W1

Transfer RNA; tRNA

Chain Y1

Transfer RNA; tRNA