IL_8RCT_170

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

UG*CAA

Length

5 nucleotides

Bulged bases

8RCT|1|A1|A|1196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_170 not in the Motif Atlas

Homologous match to IL_5J7L_049

Geometric discrepancy: 0.1578

The information below is about IL_5J7L_049

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

130

Unit IDs

8RCT|1|A1|U|1060
8RCT|1|A1|G|1061
*
8RCT|1|A1|C|1195
8RCT|1|A1|A|1196
8RCT|1|A1|A|1197

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain C1

Small ribosomal subunit protein uS3

Chain E1

Small ribosomal subunit protein uS5

Chain J1

30S ribosomal protein S10

Chain N1

Small ribosomal subunit protein uS14

Chain V2

messenger RNA

Chain Y1

Transfer RNA; tRNA