IL_8RCT_178

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

CGACC*GCAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_178 not in the Motif Atlas

Homologous match to IL_5J7L_056

Geometric discrepancy: 0.2203

The information below is about IL_5J7L_056

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_17948.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

8RCT|1|A1|C|1259
8RCT|1|A1|G|1260
8RCT|1|A1|A|1261
8RCT|1|A1|C|1262
8RCT|1|A1|C|1263
*
8RCT|1|A1|G|1272
8RCT|1|A1|C|1273
8RCT|1|A1|A|1274
8RCT|1|A1|A|1275
8RCT|1|A1|G|1276

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain N1

Small ribosomal subunit protein uS14

Chain S1

Small ribosomal subunit protein uS19