IL_8RCT_218
3D structure
- PDB id
- 8RCT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (Rotated disome interface class 2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.32 Å
Loop
- Sequence
- CGCAG*UCAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RCT_218 not in the Motif Atlas
- Homologous match to IL_5J7L_027
- Geometric discrepancy: 0.0834
- The information below is about IL_5J7L_027
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
8RCT|1|A2|C|580
8RCT|1|A2|G|581
8RCT|1|A2|C|582
8RCT|1|A2|A|583
8RCT|1|A2|G|584
*
8RCT|1|A2|U|757
8RCT|1|A2|C|758
8RCT|1|A2|A|759
8RCT|1|A2|G|760
8RCT|1|A2|G|761
Current chains
- Chain A2
- 16S ribosomal RNA
Nearby chains
- Chain H2
- Small ribosomal subunit protein uS8
- Chain L2
- Small ribosomal subunit protein uS12
- Chain O2
- 30S ribosomal protein S15
- Chain Q2
- Small ribosomal subunit protein uS17
Coloring options: