IL_8RCT_220

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

GU*AUAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_220 not in the Motif Atlas

Homologous match to IL_4LFB_025

Geometric discrepancy: 0.0773

The information below is about IL_4LFB_025

Detailed Annotation

Major groove minor groove platform; mini C-loop

Broad Annotation

No text annotation

Motif group

IL_68140.4

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

18

Unit IDs

8RCT|1|A2|G|597
8RCT|1|A2|U|598
*
8RCT|1|A2|A|640
8RCT|1|A2|U|641
8RCT|1|A2|A|642
8RCT|1|A2|C|643

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain H2

Small ribosomal subunit protein uS8

Chain Q2

Small ribosomal subunit protein uS17