IL_8RCT_238

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

GUG*CC

Length

5 nucleotides

Bulged bases

8RCT|1|A2|U|1049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_238 not in the Motif Atlas

Geometric match to IL_4LFB_042

Geometric discrepancy: 0.161

The information below is about IL_4LFB_042

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

8RCT|1|A2|G|1048
8RCT|1|A2|U|1049
8RCT|1|A2|G|1050
*
8RCT|1|A2|C|1208
8RCT|1|A2|C|1209

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain N2

Small ribosomal subunit protein uS14