IL_8RCT_247

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

CUGC*GAGGAAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_247 not in the Motif Atlas

Geometric match to IL_5J7L_053

Geometric discrepancy: 0.1556

The information below is about IL_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42032.1

Basepair signature

cWW-cSH-cWW-tWH-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

8RCT|1|A2|C|1158
8RCT|1|A2|U|1159
8RCT|1|A2|G|1160
8RCT|1|A2|C|1161
*
8RCT|1|A2|G|1175
8RCT|1|A2|A|1176
8RCT|1|A2|G|1177
8RCT|1|A2|G|1178
8RCT|1|A2|A|1179
8RCT|1|A2|A|1180
8RCT|1|A2|G|1181

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain B2

Small ribosomal subunit protein uS2

Chain G2

30S ribosomal protein S7

Chain I2

Small ribosomal subunit protein uS9