IL_8RCT_269

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

GGGAGGCUUUGAAG*UGGAGCCGACCUUGAAAUACC

Length

35 nucleotides

Bulged bases

8RCT|1|72|U|2131, 8RCT|1|72|U|2132, 8RCT|1|72|A|2170, 8RCT|1|72|A|2171, 8RCT|1|72|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RCT|1|72|G|2123
8RCT|1|72|G|2124
8RCT|1|72|G|2125
8RCT|1|72|A|2126
8RCT|1|72|G|2127
8RCT|1|72|G|2128
8RCT|1|72|C|2129
8RCT|1|72|U|2130
8RCT|1|72|U|2131
8RCT|1|72|U|2132
8RCT|1|72|G|2133
8RCT|1|72|A|2134
8RCT|1|72|A|2135
8RCT|1|72|G|2136
*
8RCT|1|72|U|2155
8RCT|1|72|G|2156
8RCT|1|72|G|2157
8RCT|1|72|A|2158
8RCT|1|72|G|2159
8RCT|1|72|C|2160
8RCT|1|72|C|2161
8RCT|1|72|G|2162
8RCT|1|72|A|2163
8RCT|1|72|C|2164
8RCT|1|72|C|2165
8RCT|1|72|U|2166
8RCT|1|72|U|2167
8RCT|1|72|G|2168
8RCT|1|72|A|2169
8RCT|1|72|A|2170
8RCT|1|72|A|2171
8RCT|1|72|U|2172
8RCT|1|72|A|2173
8RCT|1|72|C|2174
8RCT|1|72|C|2175

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain W

Transfer RNA; tRNA

Chain a2

Large ribosomal subunit protein uL1