IL_8RD8_130

3D structure

PDB id

8RD8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factors Balon and RaiA (structure 1).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.62 Å

Loop

Sequence

GAAGACU*ACGAUGAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RD8|1|iN|G|493
8RD8|1|iN|A|494
8RD8|1|iN|A|495
8RD8|1|iN|G|496
8RD8|1|iN|A|497
8RD8|1|iN|C|498
8RD8|1|iN|U|499
*
8RD8|1|iN|A|519
8RD8|1|iN|C|520
8RD8|1|iN|G|521
8RD8|1|iN|A|522
8RD8|1|iN|U|523
8RD8|1|iN|G|524
8RD8|1|iN|A|525
8RD8|1|iN|C|526

Current chains

Chain iN

16S rRNA

Nearby chains

Chain Pj

Small ribosomal subunit protein bS16