IL_8RDW_150

3D structure

PDB id

8RDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon and EF-Tu(GDP) (structure 3).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.74 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

8RDW|1|iN|G|970

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RDW_150 not in the Motif Atlas

Homologous match to IL_4LFB_036

Geometric discrepancy: 0.0863

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

69

Unit IDs

8RDW|1|iN|G|969
8RDW|1|iN|G|970
8RDW|1|iN|G|971
*
8RDW|1|iN|U|1435
8RDW|1|iN|U|1436

Current chains

Chain iN

16S rRNA

Nearby chains