IL_8RL2_029

3D structure

PDB id

8RL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human pre-60S - State 5

Experimental method

ELECTRON MICROSCOPY

Resolution

2.84 Å

Loop

Sequence

UUUC*GG

Length

6 nucleotides

Bulged bases

8RL2|1|L5|U|514

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RL2_029 not in the Motif Atlas

Geometric match to IL_5TBW_503

Geometric discrepancy: 0.3683

The information below is about IL_5TBW_503

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_25360.1

Basepair signature

cWW-cWW

Number of instances in this motif group

10

Unit IDs

8RL2|1|L5|U|512
8RL2|1|L5|U|513
8RL2|1|L5|U|514
8RL2|1|L5|C|515
*
8RL2|1|L5|G|646
8RL2|1|L5|G|647

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LL

60S ribosomal protein L13

Chain La

60S ribosomal protein L27a