IL_8RL2_152
3D structure
- PDB id
- 8RL2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human pre-60S - State 5
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.84 Å
Loop
- Sequence
- GUUAGUAC*GGAAUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RL2_152 not in the Motif Atlas
- Homologous match to IL_8P9A_369
- Geometric discrepancy: 0.3121
- The information below is about IL_8P9A_369
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.2
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
8RL2|1|L7|G|71
8RL2|1|L7|U|72
8RL2|1|L7|U|73
8RL2|1|L7|A|74
8RL2|1|L7|G|75
8RL2|1|L7|U|76
8RL2|1|L7|A|77
8RL2|1|L7|C|78
*
8RL2|1|L7|G|98
8RL2|1|L7|G|99
8RL2|1|L7|A|100
8RL2|1|L7|A|101
8RL2|1|L7|U|102
8RL2|1|L7|A|103
8RL2|1|L7|C|104
Current chains
- Chain L7
- 5S rRNA
Nearby chains
- Chain CJ
- Ribosome production factor 2 homolog
Coloring options: