IL_8RM5_010
3D structure
- PDB id
- 8RM5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the cross-exon pre-B+5'ssLNG+ATPyS complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- GGA*UCC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RM5_010 not in the Motif Atlas
- Geometric match to IL_3HHN_004
- Geometric discrepancy: 0.2496
- The information below is about IL_3HHN_004
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.6
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 241
Unit IDs
8RM5|1|6|G|33
8RM5|1|6|G|34
8RM5|1|6|A|35
*
8RM5|1|z|U|12
8RM5|1|z|C|13
8RM5|1|z|C|14
Current chains
- Chain 6
- U6 snRNA
- Chain z
- 5'SS oligo
Nearby chains
- Chain N
- Pre-mRNA-processing factor 6
Coloring options: