3D structure

PDB id
8RM5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the cross-exon pre-B+5'ssLNG+ATPyS complex
Experimental method
ELECTRON MICROSCOPY
Resolution
6.9 Å

Loop

Sequence
CG*CUG
Length
5 nucleotides
Bulged bases
8RM5|1|4|U|114
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8RM5|1|4|C|87
8RM5|1|4|G|88
*
8RM5|1|4|C|113
8RM5|1|4|U|114
8RM5|1|4|G|115

Current chains

Chain 4
U4 snRNA

Nearby chains

Chain 43
Small nuclear ribonucleoprotein Sm D3
Chain 4b
Small nuclear ribonucleoprotein-associated proteins B and B'
Chain 4g
Small nuclear ribonucleoprotein G
Chain B
U5 small nuclear ribonucleoprotein 200 kDa helicase

Coloring options:

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