IL_8RO2_005
3D structure
- PDB id
- 8RO2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Integrative Structure of the human intron lariat Spliceosome (ILS'')
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GCAUA*UCC
- Length
- 8 nucleotides
- Bulged bases
- 8RO2|1|5|C|25
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8RO2|1|5|G|24
8RO2|1|5|C|25
8RO2|1|5|A|26
8RO2|1|5|U|27
8RO2|1|5|A|28
*
8RO2|1|5|U|54
8RO2|1|5|C|55
8RO2|1|5|C|56
Current chains
- Chain 5
- U5 snRNA
Nearby chains
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain C
- 116 kDa U5 small nuclear ribonucleoprotein component
- Chain P
- Spliceosome-associated protein CWC15 homolog
- Chain R
- SNW domain-containing protein 1
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