IL_8RPY_122

3D structure

PDB id

8RPY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli 50S subunit in complex with the antimicrobial peptide Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

AUAUGUAG*UGAAAU

Length

14 nucleotides

Bulged bases

8RPY|1|A|U|1714

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RPY|1|A|A|1711
8RPY|1|A|U|1712
8RPY|1|A|A|1713
8RPY|1|A|U|1714
8RPY|1|A|G|1715
8RPY|1|A|U|1716
8RPY|1|A|A|1717
8RPY|1|A|G|1718
*
8RPY|1|A|U|1742
8RPY|1|A|G|1743
8RPY|1|A|A|1744
8RPY|1|A|A|1745
8RPY|1|A|A|1746
8RPY|1|A|U|1747

Current chains

Chain A

23S ribosomal RNA

Nearby chains