IL_8RRI_007
3D structure
- PDB id
- 8RRI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with antibiotic tigecycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GAAAC*GUGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 8RRI|1|A|G|2011, 8RRI|1|A|G|2015
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RRI_007 not in the Motif Atlas
- Homologous match to IL_9DFE_016
- Geometric discrepancy: 0.1368
- The information below is about IL_9DFE_016
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73855.1
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
8RRI|1|A|G|1906
8RRI|1|A|A|1907
8RRI|1|A|A|1908
8RRI|1|A|A|1909
8RRI|1|A|C|1910
*
8RRI|1|A|G|2009
8RRI|1|A|U|2010
8RRI|1|A|G|2011
8RRI|1|A|A|2012
8RRI|1|A|U|2013
8RRI|1|A|A|2014
8RRI|1|A|G|2015
8RRI|1|A|C|2016
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
Coloring options: