IL_8RRI_028

3D structure

PDB id

8RRI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with antibiotic tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GCAAAUCUUA*UUCAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RRI|1|A|G|2478
8RRI|1|A|C|2479
8RRI|1|A|A|2480
8RRI|1|A|A|2481
8RRI|1|A|A|2482
8RRI|1|A|U|2483
8RRI|1|A|C|2484
8RRI|1|A|U|2485
8RRI|1|A|U|2486
8RRI|1|A|A|2487
*
8RRI|1|A|U|2648
8RRI|1|A|U|2649
8RRI|1|A|C|2650
8RRI|1|A|A|2651
8RRI|1|A|G|2652
8RRI|1|A|C|2653

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain E

39S ribosomal protein L3, mitochondrial

Chain L

39S ribosomal protein L14, mitochondrial

Chain Q

39S ribosomal protein L19, mitochondrial