IL_8RRI_069

3D structure

PDB id

8RRI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with antibiotic tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UUUUA*UGAACA

Length

11 nucleotides

Bulged bases

8RRI|1|AA|A|1047, 8RRI|1|AA|C|1048

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RRI|1|AA|U|946
8RRI|1|AA|U|947
8RRI|1|AA|U|948
8RRI|1|AA|U|949
8RRI|1|AA|A|950
*
8RRI|1|AA|U|1044
8RRI|1|AA|G|1045
8RRI|1|AA|A|1046
8RRI|1|AA|A|1047
8RRI|1|AA|C|1048
8RRI|1|AA|A|1049

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AL

28S ribosomal protein S15, mitochondrial

Chain AN

28S ribosomal protein S17, mitochondrial

Chain AT

Small ribosomal subunit protein mS25