IL_8RRI_098
3D structure
- PDB id
- 8RRI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with antibiotic tigecycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UCAAA*UACGCA
- Length
- 11 nucleotides
- Bulged bases
- 8RRI|1|AA|A|1513, 8RRI|1|AA|C|1537, 8RRI|1|AA|C|1539
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8RRI|1|AA|U|1510
8RRI|1|AA|C|1511
8RRI|1|AA|A|1512
8RRI|1|AA|A|1513
8RRI|1|AA|A|1514
*
8RRI|1|AA|U|1535
8RRI|1|AA|A|1536
8RRI|1|AA|C|1537
8RRI|1|AA|G|1538
8RRI|1|AA|C|1539
8RRI|1|AA|A|1540
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain A0
- 28S ribosomal protein S34, mitochondrial
- Chain A3
- Aurora kinase A-interacting protein
- Chain AL
- 28S ribosomal protein S15, mitochondrial
- Chain L
- 39S ribosomal protein L14, mitochondrial
- Chain Q
- 39S ribosomal protein L19, mitochondrial
Coloring options: