IL_8RRI_099

3D structure

PDB id

8RRI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with antibiotic tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GGACAUU*AACCCC

Length

13 nucleotides

Bulged bases

8RRI|1|AA|U|1520, 8RRI|1|AA|C|1532

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RRI|1|AA|G|1515
8RRI|1|AA|G|1516
8RRI|1|AA|A|1517
8RRI|1|AA|C|1518
8RRI|1|AA|A|1519
8RRI|1|AA|U|1520
8RRI|1|AA|U|1521
*
8RRI|1|AA|A|1529
8RRI|1|AA|A|1530
8RRI|1|AA|C|1531
8RRI|1|AA|C|1532
8RRI|1|AA|C|1533
8RRI|1|AA|C|1534

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A0

28S ribosomal protein S34, mitochondrial

Chain A3

Aurora kinase A-interacting protein

Chain AL

28S ribosomal protein S15, mitochondrial

Chain AV

28S ribosomal protein S27, mitochondrial