IL_8RUJ_006

3D structure

PDB id

8RUJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and ARN25850 after 1h soaking

Experimental method

X-RAY DIFFRACTION

Resolution

3.12 Å

Loop

Sequence

AUAUGAGG*UAAAU

Length

13 nucleotides

Bulged bases

8RUJ|1|A|U|152, 8RUJ|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RUJ|1|A|A|149
8RUJ|1|A|U|150
8RUJ|1|A|A|151
8RUJ|1|A|U|152
8RUJ|1|A|G|153
8RUJ|1|A|A|154
8RUJ|1|A|G|155
8RUJ|1|A|G|156
*
8RUJ|1|A|U|221
8RUJ|1|A|A|222
8RUJ|1|A|A|223
8RUJ|1|A|A|224
8RUJ|1|A|U|225

Current chains

Chain A

Domains 1-5

Nearby chains