IL_8RUL_004

3D structure

PDB id

8RUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of Li+ and Mg2+

Experimental method

X-RAY DIFFRACTION

Resolution

3.62 Å

Loop

Sequence

CAAG*UGAAGGAAG

Length

13 nucleotides

Bulged bases

8RUL|1|A|A|106, 8RUL|1|A|G|107

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RUL|1|A|C|76
8RUL|1|A|A|77
8RUL|1|A|A|78
8RUL|1|A|G|79
*
8RUL|1|A|U|103
8RUL|1|A|G|104
8RUL|1|A|A|105
8RUL|1|A|A|106
8RUL|1|A|G|107
8RUL|1|A|G|108
8RUL|1|A|A|109
8RUL|1|A|A|110
8RUL|1|A|G|111

Current chains

Chain A

Domains 1-5

Nearby chains