IL_8RUL_007

3D structure

PDB id

8RUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of Li+ and Mg2+

Experimental method

X-RAY DIFFRACTION

Resolution

3.62 Å

Loop

Sequence

GAGGAACACGAAC*GC

Length

15 nucleotides

Bulged bases

8RUL|1|A|A|137, 8RUL|1|A|A|138

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RUL|1|A|G|133
8RUL|1|A|A|134
8RUL|1|A|G|135
8RUL|1|A|G|136
8RUL|1|A|A|137
8RUL|1|A|A|138
8RUL|1|A|C|139
8RUL|1|A|A|140
8RUL|1|A|C|141
8RUL|1|A|G|142
8RUL|1|A|A|143
8RUL|1|A|A|144
8RUL|1|A|C|145
*
8RUL|1|A|G|229
8RUL|1|A|C|230

Current chains

Chain A

Domains 1-5

Nearby chains