IL_8RUL_009

3D structure

PDB id

8RUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of Li+ and Mg2+

Experimental method

X-RAY DIFFRACTION

Resolution

3.62 Å

Loop

Sequence

UAGGUA*UACAGA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RUL|1|A|U|158
8RUL|1|A|A|159
8RUL|1|A|G|160
8RUL|1|A|G|161
8RUL|1|A|U|162
8RUL|1|A|A|163
*
8RUL|1|A|U|214
8RUL|1|A|A|215
8RUL|1|A|C|216
8RUL|1|A|A|217
8RUL|1|A|G|218
8RUL|1|A|A|219

Current chains

Chain A

Domains 1-5

Nearby chains