IL_8RUL_018

3D structure

PDB id

8RUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of Li+ and Mg2+

Experimental method

X-RAY DIFFRACTION

Resolution

3.62 Å

Loop

Sequence

AUAUGAGG*UAAAU

Length

13 nucleotides

Bulged bases

8RUL|1|A|U|152, 8RUL|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RUL|1|A|A|149
8RUL|1|A|U|150
8RUL|1|A|A|151
8RUL|1|A|U|152
8RUL|1|A|G|153
8RUL|1|A|A|154
8RUL|1|A|G|155
8RUL|1|A|G|156
*
8RUL|1|A|U|221
8RUL|1|A|A|222
8RUL|1|A|A|223
8RUL|1|A|A|224
8RUL|1|A|U|225

Current chains

Chain A

Domains 1-5

Nearby chains