IL_8RUM_022

3D structure

PDB id

8RUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+, and intronistat B

Experimental method

X-RAY DIFFRACTION

Resolution

3.62 Å

Loop

Sequence

CAUAGUAC*GGAAGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RUM|1|A|C|296
8RUM|1|A|A|297
8RUM|1|A|U|298
8RUM|1|A|A|299
8RUM|1|A|G|300
8RUM|1|A|U|301
8RUM|1|A|A|302
8RUM|1|A|C|303
*
8RUM|1|A|G|316
8RUM|1|A|G|317
8RUM|1|A|A|318
8RUM|1|A|A|319
8RUM|1|A|G|320
8RUM|1|A|G|321

Current chains

Chain A

Domains 1-5

Nearby chains