IL_8RUN_001

3D structure

PDB id

8RUN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+, and ARN25850

Experimental method

X-RAY DIFFRACTION

Resolution

3.73 Å

Loop

Sequence

GCAUG*CUUACC

Length

11 nucleotides

Bulged bases

8RUN|1|A|U|13, 8RUN|1|A|A|260, 8RUN|1|A|C|261

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RUN|1|A|G|10
8RUN|1|A|C|11
8RUN|1|A|A|12
8RUN|1|A|U|13
8RUN|1|A|G|14
*
8RUN|1|A|C|257
8RUN|1|A|U|258
8RUN|1|A|U|259
8RUN|1|A|A|260
8RUN|1|A|C|261
8RUN|1|A|C|262

Current chains

Chain A

Domains 1-5

Nearby chains