IL_8RUN_007

3D structure

PDB id

8RUN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+, and ARN25850

Experimental method

X-RAY DIFFRACTION

Resolution

3.73 Å

Loop

Sequence

GAGGAACACGAAC*GC

Length

15 nucleotides

Bulged bases

8RUN|1|A|A|137, 8RUN|1|A|A|138

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RUN|1|A|G|133
8RUN|1|A|A|134
8RUN|1|A|G|135
8RUN|1|A|G|136
8RUN|1|A|A|137
8RUN|1|A|A|138
8RUN|1|A|C|139
8RUN|1|A|A|140
8RUN|1|A|C|141
8RUN|1|A|G|142
8RUN|1|A|A|143
8RUN|1|A|A|144
8RUN|1|A|C|145
*
8RUN|1|A|G|229
8RUN|1|A|C|230

Current chains

Chain A

Domains 1-5

Nearby chains