IL_8RUN_019

3D structure

PDB id

8RUN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+, and ARN25850

Experimental method

X-RAY DIFFRACTION

Resolution

3.73 Å

Loop

Sequence

AUG*CUUUCUGCCAAAGU

Length

17 nucleotides

Bulged bases

8RUN|1|A|A|207

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RUN|1|A|A|167
8RUN|1|A|U|168
8RUN|1|A|G|169
*
8RUN|1|A|C|197
8RUN|1|A|U|198
8RUN|1|A|U|199
8RUN|1|A|U|200
8RUN|1|A|C|201
8RUN|1|A|U|202
8RUN|1|A|G|203
8RUN|1|A|C|204
8RUN|1|A|C|205
8RUN|1|A|A|206
8RUN|1|A|A|207
8RUN|1|A|A|208
8RUN|1|A|G|209
8RUN|1|A|U|210

Current chains

Chain A

Domains 1-5

Nearby chains