IL_8S8I_045

3D structure

PDB id

8S8I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a yeast 48S-AUC preinitiation complex in closed conformation (model py48S-AUC-eIF1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

UGGUUC*GGACCA

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8S8I|1|2|U|821
8S8I|1|2|G|822
8S8I|1|2|G|823
8S8I|1|2|U|824
8S8I|1|2|U|825
8S8I|1|2|C|826
*
8S8I|1|2|G|844
8S8I|1|2|G|845
8S8I|1|2|A|846
8S8I|1|2|C|847
8S8I|1|2|C|848
8S8I|1|2|A|849

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain L

KLLA0A10483p